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<h1 id="index">Index</h1>

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 <a href="#C"><strong>C</strong></a>
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<h2 id="C">C</h2>
<table style="width: 100%" class="indextable genindextable"><tr>
  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="index.html#fastlmm.util.compute_auto_pcs">compute_auto_pcs() (in module fastlmm.util)</a>
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<h2 id="E">E</h2>
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  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="index.html#fastlmm.association.epistasis">epistasis() (in module fastlmm.association)</a>
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<h2 id="F">F</h2>
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      <li><a href="index.html#fastlmm.inference.FastLMM">FastLMM (class in fastlmm.inference)</a>
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  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="index.html#fastlmm.inference.FastLMM.fit">fit() (fastlmm.inference.FastLMM method)</a>

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        <li><a href="index.html#fastlmm.inference.LinearRegression.fit">(fastlmm.inference.LinearRegression method)</a>
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<h2 id="H">H</h2>
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  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="index.html#fastlmm.association.heritability_spatial_correction">heritability_spatial_correction() (in module fastlmm.association)</a>
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<h2 id="L">L</h2>
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      <li><a href="index.html#fastlmm.inference.LinearRegression">LinearRegression (class in fastlmm.inference)</a>
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<h2 id="M">M</h2>
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  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="index.html#fastlmm.util.manhattan_plot">manhattan_plot() (in module fastlmm.util)</a>
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<h2 id="P">P</h2>
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  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="index.html#fastlmm.inference.FastLMM.predict">predict() (fastlmm.inference.FastLMM method)</a>

      <ul>
        <li><a href="index.html#fastlmm.inference.LinearRegression.predict">(fastlmm.inference.LinearRegression method)</a>
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<h2 id="S">S</h2>
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  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="index.html#fastlmm.inference.FastLMM.score">score() (fastlmm.inference.FastLMM method)</a>

      <ul>
        <li><a href="index.html#fastlmm.inference.LinearRegression.score">(fastlmm.inference.LinearRegression method)</a>
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      <li><a href="index.html#fastlmm.association.single_snp">single_snp() (in module fastlmm.association)</a>
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      <li><a href="index.html#fastlmm.association.single_snp_all_plus_select">single_snp_all_plus_select() (in module fastlmm.association)</a>
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  <td style="width: 33%; vertical-align: top;"><ul>
      <li><a href="index.html#fastlmm.association.single_snp_linreg">single_snp_linreg() (in module fastlmm.association)</a>
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      <li><a href="index.html#fastlmm.association.single_snp_scale">single_snp_scale() (in module fastlmm.association)</a>
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      <li><a href="index.html#fastlmm.association.single_snp_select">single_snp_select() (in module fastlmm.association)</a>
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      <li><a href="index.html#fastlmm.association.snp_set">snp_set() (in module fastlmm.association)</a>
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